diff --git a/docs/jsdoc.json b/docs/jsdoc.json
index 4a90978a..d2b4df6a 100644
--- a/docs/jsdoc.json
+++ b/docs/jsdoc.json
@@ -13,7 +13,9 @@
 		"include": [
 			"packages/master/src/",
 			"packages/master/master.js",
+			"packages/slave/src/",
 			"packages/slave/slave.js",
+			"packages/ctl/src/",
 			"packages/ctl/ctl.js",
 			"packages/lib/",
 			"plugins/"
diff --git a/packages/lib/plugin.js b/packages/lib/plugin.js
index 72c6dbc1..b9810254 100644
--- a/packages/lib/plugin.js
+++ b/packages/lib/plugin.js
@@ -39,7 +39,7 @@ class BaseInstancePlugin {
 
 		/**
 		 * Instance the plugin started for
-		 * @type {module:slave/slave~Instance}
+		 * @type {module:slave/src/Instance}
 		 */
 		this.instance = instance;
 
@@ -49,7 +49,7 @@ class BaseInstancePlugin {
 		 * With the exepction of accessing the slave's config you should
 		 * avoid ineracting with the slave object directly.
 		 *
-		 * @type {module:slave/slave~Slave}
+		 * @type {module:slave/src/Slave}
 		 */
 		this.slave = slave;
 
diff --git a/packages/slave/src/Instance.js b/packages/slave/src/Instance.js
index a7169ec2..99d7aebd 100644
--- a/packages/slave/src/Instance.js
+++ b/packages/slave/src/Instance.js
@@ -108,6 +108,7 @@ const serverSettingsActions = {
  *
  * @param {Instance} instance - Instance to link mods for
  * @param {string} sharedMods - Path to folder to link mods from.
+ * @private
  */
 async function symlinkMods(instance, sharedMods) {
 	await fs.ensureDir(instance.path("mods"));
diff --git a/packages/slave/src/Slave.js b/packages/slave/src/Slave.js
index c894b745..4c28b605 100644
--- a/packages/slave/src/Slave.js
+++ b/packages/slave/src/Slave.js
@@ -70,6 +70,7 @@ function checkFilename(name) {
  *
  * @param {string} name - Arbitrary name string
  * @returns {string} Filename suitable to use in the filesystem
+ * @private
  */
 function cleanFilename(name) {
 	// copied from checkFilename
@@ -119,6 +120,7 @@ function checkRequestSaveName(name) {
  * @param {string} instancesDir - Directory containing instances
  * @returns {Map<integer, Object>}
  *     mapping between instance id and information about this instance.
+ * @private
  */
 async function discoverInstances(instancesDir) {
 	let instanceInfos = new Map();
@@ -159,6 +161,7 @@ async function discoverInstances(instancesDir) {
  * Handles running the slave
  *
  * Connects to the master server over the WebSocket and manages intsances.
+ * @alias module:slave/src/Slave
  */
 class Slave extends libLink.Link {
 	// I don't like God classes, but the alternative of putting all this state